Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLS-FWAGLKVQPILADEVQTFKALITIHKVLQEGHPVTLREAMANRGWID-SLSRGMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFR-----HIGNNECRISALVPLVAESYGIYKFITSMLRAMHS-----STGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL------------ |
| 1HF8 Chain:A ((19-281)) | ------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAF-----------DFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98757 for 1784 contacts (-55.4/contact) +
2D Compatibility (PS) -25227 + (NN) -11480 + (LL) 1788
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -141476.0 ( -79.30 by residue)
QMean score : 0.347
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