Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------PYLKEKSSATVYFQTVKH----------NNIRDLVRRCITRTSQVLVILMDVFT---------DVEIFCDILEAANKRGVFVCVLLDQ---------GGVKLFQEMCDKV-----QISDSHLKNISIRSVEGEIYCAKSGRKFAGQ---IREKFIISDWRFVLSGSYSFTWLCGHVHRNILSKFTGQAVELFDEE-FRHLYASSKPVMGLKSP------ |
1F0I Chain:A ((259-504)) | NVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAA-GVKVRIVVSDPANRGYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPNGKWADGHPYAQHHKLVSVDSSTFYIGSKNLYPS--WLQDFGYIVESPEAAKQLDAKLLDPQWKYSQETATVDYARGICGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133745 for 1224 contacts (-109.3/contact) +
2D Compatibility (PS) -18793 + (NN) -8427 + (LL) -16
1D Compatibility (HY) 800 + (ID) 950
Total energy: -161131.0 ( -131.64 by residue)
QMean score : 0.406
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