Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MGGKQRDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSCPE-DPWTVGK-NEFSQTVGEVFYTKNRNFCLP----------------GVPWNMTVITSLQQELCPSFLL--PSAPALGRCFPWTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVK-IFEDFAQSWYW----ILVALGVA-------LVLSLLFILLLRLVAGPLVLVLIL--------GVLGVLAYG-----IYYCWEEYRVLRDKGASISQLGFTTNLSAYQSV--------QETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLVTFVLLLICI-------AYWAMTALYLATSG------QPQYVLWASNISSPG---CEKVPINTSC-------NPTAHLVNSSCP--------------GLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVL---AGAFASFYWAFHKPQDIPTFPLISAFIRTLRY-------------HTGSLAFGALILTLV-----QIARVILEYIDHKLRGVQNPVARCIMCCFKCC------LWCLEKFIKF-------LNRNAYIMIAIYGKNFCVSAKNAFMLLMRNI-------VRVVVLDKVTDLLLFFGKLLVV-------GGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIA-SGFFSVFGMCVDTLFLCFLEDLER-NNGSLDRPYYMSKSLLKILGKKNEAPPDNKKRKK |
| 4CR2 Chain:Z ((49-993)) | LELLVERLKEDDSSLYEASLN---ALKESIKNSTSS-----------------------MTAVPKPLKFLRPTYPDLCSIYDKWTDPNLK--SSLADVLSILAMTYSENGKHDSLRYRLLSDVSDFEGWGHEYIRHLALEIGEVYNDQVEKDAEDETSSDGSKSDGSAATSGFEFSKEDTLRLCLDIVPYFLKHNGEEDAVDLLLEIESI--DKLPQFVDENTFQRVCQYMVACVPLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYEGVQDIIGNGKLSEHFLYLAKELNLT---GPKVPEDIYKSHLDNSKSVFSSAGLDSAQQNLASSFVNGFLNLGYCNDKLIVDNDNWVYKTKGDGMTSAVASIGSIYQWNLDGLQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDYVTNPDTKISSAAILGLGIAFAGSKNDEVLGLLLPIAASTDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTAIELKTDWVRFLALALGILYMGQGEQVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVLLIQDLLHRLTLAYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQMKVFDTLTRFSHDADLEVSMNSIFAMGLCG---AGTNNARLAQLLRQLASYYSREQDALFITRLAQGLLHLGKGTMTMDVFNDAHVLNKVTLASILTTAVGLVSPSFMLKHHQLFYMLNAGIRPKFILALNDEGEPIKVNVRVGQPVLLNHGERAELETDEYISYTSHIEGVVILKKN---PDYREEE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -544823 for 5189 contacts (-105.0/contact) +
2D Compatibility (PS) -69238 + (NN) -22357 + (LL) 3216
1D Compatibility (HY) -25200 + (ID) 5500
Total energy: -663902.0 ( -127.94 by residue)
QMean score : 0.240
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