Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAEARVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVK-----------LRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKG-EYQGVFHCAVETAK-LGPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIKVPS |
| 2LCK Chain:A ((14-302)) | ------TVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS-EHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58340 for 1550 contacts (-37.6/contact) +
2D Compatibility (PS) -27911 + (NN) -418 + (LL) 912
1D Compatibility (HY) -16400 + (ID) 5050
Total energy: -107207.0 ( -69.17 by residue)
QMean score : -0.029
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