Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MELEGRGAGGVAGGP--------AAGPGRSPGESALLDGWLQRGVGRG---AGGGEAGACRPPVRQDPDSGPDYEALPAGATVTT---------HMVAGAVAGILEHCVMYPID-CVKTRMQSLQPDPAARYRNV--------------------LEALWRIIRTEGLWRPMRGL-------------------NVTATGAGPAHALYFACYEKLKKTLSDVIH-----------------------------------PGGNS---HIANG-------------------AAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRV---------------------------------TDCVRAVWQNEGAGAFYRSYTTQL-TMNVPFQAIHFMTYEFLQEHF----NPQRRYNPSSHVLSGACAGAVAAAATTPLD---VCKTLLNTQESLALNSHITG--HITGMASAFRTVYQV--GGVTAYFRGVQARVIYQIPST------AIAWSVYEFFKYLITKRQEEWRAGK |
| 4KYI Chain:A ((4-544)) | GSEISKTEAGQYSVSAPEHKGLVLSGGGAKGISYLGMIQALQERGKIKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLDITKLLDNSGVGFRARGDRFRNILDVIYMMQMKKHLESVQQPIPPEQQMNYGILKQKIALYEDKLSRAGIVINNVDDIINLTKSVKDLEKLDKALNSIPTELKGAKGEQLENPRLTLGDLGRLRELLPEENKHLIKNLSVVVTNQTKHELERYSEDTTPQQSIAQVVQWSGAHPVLFVPGRNAKGEYIADGGILDNMPEIEGLDREEVLCVKAEAGTAFEDRVNKAKQSAMEAISWFKARMDSLVTSSVLNREKVYYNIDNMIYINTGEVTTTNTSPTPEQRARAVKNGYDQTMQLLDSHKQTFDHPLMAILYIGHDKLKDALIDEKSEKEIFEASAHAQAILHLQEQIVKEMNDGDYSSVQNYLDQIEDILTVDAKMDDIQKEKAFALCIKQVNFLSEGKLETYLNKVEAEAKAAAEPSWATKILNLLWAPIEWVVSLFKGPAQDFK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80247 for 2418 contacts (-33.2/contact) +
2D Compatibility (PS) -36754 + (NN) 1853 + (LL) 36
1D Compatibility (HY) -12000 + (ID) 3000
Total energy: -130112.0 ( -53.81 by residue)
QMean score : 0.063
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