Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTAYLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCC-LTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLAL-AG--ALALRNWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVL-D-PHG---APLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL |
| 2GFP Chain:A ((17-360)) | ------------------------------------------------VAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDL------YERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRA--CYLFLLVLCAGVTFSMARWMPETRPVDAP----RTRLLTSYKTLFGNSGFNCYLLMLIGG-LAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNK-RFSTLMW-QSVICCLLAGLL-MWIPDWF--GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPL------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274529 for 2779 contacts (-98.8/contact) +
2D Compatibility (PS) -33340 + (NN) 3824 + (LL) 7788
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -306857.0 ( -110.42 by residue)
QMean score : 0.241
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