Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDII-----STMFNRKFMEELFKPQELYSKKALRTVY-ERLAHASIMKLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHLDTIKGFIRDS-PTILQQVDETLRQLTEIYGGLSAGEFQLIRQTLLIFFQDLHIRVSMFLKDKVQNNNGRFVLPVSGPVPWGTEVPGLIRMFNNKGEEVKRIEFKHGGNYVPAPKEGSFELYGDRVLKLGTNMYSVNQPVETHVSGSSKNLASWTQESIAPNPLAKEELNFLARLMGGMEIKKPSGPEPGFRLNLFTTDEEEEQAALTRPEELSYEVINIQATQDQQRSEELARIMGEFEITEQPRLSTSKGDDLLAMMDEL |
| 4DHI Chain:D ((13-148)) | ----------------------QRLLAEPVPGIKAEPDE----SNARYFHVVIAGPQDSPFEGGTFKLELFLPEE-YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLL--SIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNNI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32583 for 917 contacts (-35.5/contact) +
2D Compatibility (PS) -12999 + (NN) 6672 + (LL) 16256
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -29454.0 ( -32.12 by residue)
QMean score : 0.201
|
|
|