Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFANLKYVSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNN-------LLYVALSN----LDAATYQVTYQLK-ILTTA-LFSVSMLS------KKLGVYQWLSLV-----ILMTGVAFVQWPSD-SQLDSKELSAGSQF--VGLMAVLTACFSSGFAGVYF--------------EKILKET-KQSVWIRNIQLGFFGSIF----GLMGVYIYDGELVSKNGFFQGYNRLTWIV----VV-------LQALGGLVIAAVIKY-ADNILKGFATSLSIILSTLISYFWLQDF----------VPTSV------FFLGAILVITATFLYGYDPKPA--GNPTKA---- |
| 4FS7 Chain:A ((2-394)) | -----YDFVIDEITYNFTKEHGTVEVSGLREFLNPLVVNIPP-------------VVTYKDNKYDVVSIGY----AAFQGCRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYLVEEIGKRSFRGCTSLSNINFPLSLRKIGANAFQGCINLKKVELPKRLEQYRYDFEDTTKFKWIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232290 for 1994 contacts (-116.5/contact) +
2D Compatibility (PS) -30529 + (NN) 14512 + (LL) 2972
1D Compatibility (HY) -19600 + (ID) 2700
Total energy: -267635.0 ( -134.22 by residue)
QMean score : 0.168
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