Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQ------------------PSDATNGLLVALLGGGLPAGFVGPLSRMAYQASNLPSLELVICRCLFHLPIALLLKLRGDPLLGPPDIRG--RTCFCALLNVLNIGCA--YSAVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWCGLLGSILGLIIIVG-PGLWTLQEGTTGVYTGLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFVLQSPVLPSDLLSWSCVGAVGILTLVSFTCVGYAVTK-AHPALVCAVLHSEVVMALILQYFMLHETVAPSDIMGAGVVLGSIAIITARNLICERTGKVEE |
| 4N5H Chain:X ((1-315)) | MADEEAMLAKVQASWAQTAARDKARYADERVPEDVHWETEYRYEQSADPQQTLNLYYPAKRRNATMPTVIDIHGGGWFYG--------------DRNLNRNYCRYLASQGYAVMGM--GYRLLPDVDLRGQIQDIFASLRWLSHFGPQRGFDLDHVLLTGD--SAGGHLASLVACIQQS-AELQELFGVSRVNFNFTLVALVCPVAEPSKLPEAAGDMSDMAAF-YLDKLSGGDQALVDHLNFSQVVKGLDLPPFMLIGGQ-------NDSFYLQSQALLKVFDA----------NHVTYTTKLWPASAGPHLKHVFNVQHWEWPESIETNLEMLRTFDALSKQQDQA--------------------EENE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238773 for 2327 contacts (-102.6/contact) +
2D Compatibility (PS) -29041 + (NN) -4710 + (LL) 4272
1D Compatibility (HY) -6800 + (ID) 3100
Total energy: -278152.0 ( -119.53 by residue)
QMean score : 0.249
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