Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDCTSSVTFLPFMSRLPTYY-LTTFFVGEGLSGLLPALVALAQGSG-LTTCVNVTEISDSVPSPVPTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAFFVLQRQPRCWEASVEDLLNDQVTLHSIRPREENDLGPAGTVDSSQGQGYLEEKAAPCCPAHLAFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSLLFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVVLRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFCNLHCPA |
| 4TKO Chain:B ((3-349)) | ------------HRIEYAITNAVFVKADE-----------LSYLS------------------FRVS--------------GKVIEVYK----DLGDYVKRGE----------ALAKLD--------------PTYYELEKRTLEKKMSALLEKKKALEIKIQKLEKGLHISLSAKKLKVESLKKKREALREKLLQVEEKIKLVKLDWERYKSLFQK-GLIPRRKFEEVDTNLKVLLHEREYLEKSIQEINTEIKRAKKGIENARNEFKTIEELKKELSSLEEEIKSLKERIKTAEQKIKDTVLI--------APFDGVVAKRF----ISRGDVVRAGQPAFALV-NPESFYVEVLLEETKLKGVKV----------GNKAYVRLDAYP--DILFEGVVEEISP-------VQRIPVKIKITKGDLSL---------LRVG-------MGGEVEIRRT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220490 for 2127 contacts (-103.7/contact) +
2D Compatibility (PS) -33402 + (NN) 10534 + (LL) 13432
1D Compatibility (HY) -6000 + (ID) 3000
Total energy: -238926.0 ( -112.33 by residue)
QMean score : 0.077
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