Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGKVAVQECGPPAVSWVPEEGEKLDQEDEDQVKDRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVALGQY-TSQGSVTA-------WRKICPLFQGIGLASVVIESYLNVYYIIILAWALFYLFSSFTSELPWTTCNNFWNTEHCTDFLNHSGAGTVTPFENFTSPVMEFWERRVLGITSGIHDLGSLRWEL------ALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVILLIRGVTLP----GAYQGIIYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAG--FVVFSILGFMSQEQGVPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASIDMFPRQLRKSGRRELLILTIAVMCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSLFEVVCISWVYGADRFYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNVYVYPPWGYSIGWFLALSSMVCVPLFVVITLLKTRGPFRKRLRQLITPDSSLPQPKQHPCLDGSAGRNFGPSPTREGLIAGEKETHL |
| 4HMK Chain:A ((4-437)) | ----------------------------------KREHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRN--RFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPP----------TD-----PDSILRPFKEFL--------YSYIGVPKG--DEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTL---FILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKASVILGGSISIPAAVAFFGVANAVAIAKAGAF--NLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIA-----FLEDELKLSRKHAVLWTAAIVFFSAHLVMFLNKSL---DEMDFWAGT-IGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLVVWAREYEETHWTVWITRFYIIGLFLFLTFLVFLAERRRNHES---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -477055 for 3647 contacts (-130.8/contact) +
2D Compatibility (PS) -42068 + (NN) -3849 + (LL) 7808
1D Compatibility (HY) -45600 + (ID) 5850
Total energy: -566614.0 ( -155.36 by residue)
QMean score : 0.276
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