Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAARTAVLRVKRKRSAEPAEALVLACKRLRSDAVES-----AAQKTSEGLERAAENNVFHLVATVCSQEEPVQPLLREVLRPSRDSQQRVRRNLRASAREVRQEGRYRVLSSRRSLGTTSSGQESEYTPGNPEAAGNSGFQLLDLVHEEGEPEAASAGSCKTSDPDVILCNSV--ELIRERLTVSEDGPGVRRQEEQKHDDYVYDIYYLETATPGWIENILSVQPYSQEWELVNDDQEPEDIYDDEDDENSENNWRNEYPEEESSDGDEDSRGSADY----NSLSEEERGSSRQRMWSKYPLDVQKEFGYDSPHDLDSD |
| 4QCC Chain:A ((5-274)) | ---TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTV-LKPEQVDALAR------MGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALE----------AGAQALKIFP-SSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSD--------LYRAGQSVERTAQQAAAFVKAYREAQKQKEQRQDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26238 for 1981 contacts (13.2/contact) +
2D Compatibility (PS) -26968 + (NN) 5258 + (LL) 1772
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: 1200.0 ( 0.61 by residue)
QMean score : 0.176
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