Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPRIGPAGEVPQVPDKETKATMGTENTPGGKASPDPQDVRPSVFHNIKLFVLCHSLLQLAQLMISGYLKSSISTVEKRFGLSSQTSGLLASFNEVGNTALIVFVSYFGSRVHRPRMIGYGAILVALAGLLMTLPHFISEPYRYDNTSPEDMPQDFKASLCLPTTSAPASAPSNGNCSSYTETQHL---SVVGIMFVAQTLLGVGGVPIQPFGISYIDDFAHNSNSPLYLGILFAVTMMGPGLAFGLGSLMLRLYVDINQMPEGGISLTIKDPRWVGAWWLGFLIAAGAVALAAIPYFFFPKEMPKEKRELQFRRKVLAVTDSPARKGKDSPSKQSPGESTKKQDGLVQIAPNLTVIQFIKVFPRVLLQTLRHPIFLLVVLSQVCLSSMAAGMAIFLPKFLERQFSITASYANLLIGCLSFPSVIVGIVVGGVLVKRLHLGPVGCGALCLLGMLLCLFFSLPLFFIGCSSHQIAGITHQTSAHPGLELSPSCMEACSCPLDGFNPVCDPSTRVEYI---TPCHAGCSSWVVQDALDNSQVFYTNCSCVVEGNPVLAGSCDSTCSHLVVPFLLLVSLGSALACLTHTPSFMLILRGVKKEDKTLAVGIQFMFLRILAWMPSPVIHGSAIDTTCVHWALSCGRRAVCRYYNNDLLRNRFIGLQFFFKTGSVICFALVLAVLRQQDKEARTKESRSSPAVEQQLLVSGPGKKPEDSRV |
| 4BKW Chain:A ((1-530)) | -AMNLIPEDGLPPILISTYAVEEKPSQISVMQQLEDPDPLVFVLNANLLSMVKIVNY---------------------------------------VNRKCWCFTTK------GMHAVGQSEIVILLQ----------------CLPDEKCLPKDIFNHFVQLYRDALAGNVVSNLGHSFFSQSFLGSKEHGGFLYVTSTYQSLQDLVLPTPP------------------YLFGILIQKW------------------------------ETPWAKVFPIRLMLRLGAEY----RLYPCPLFSVRFRKPLFGETGHTIMNLLADFRNYQYTLPVVQGLVVDMEVR-----------------------------KTSIKIPSNRYNEMMKAMNKSNEHVLAGGACFNEKADSHLVCVQNDDGNYQTQAISIHNQPRKVTGAS---------------------FFVFSGAL--AKSSIVEDGVMVQITAENMDSLRQALREMKDFTIEHIHIQWVDDDKNVSKGVVSPIDGKSMETITNVKIFHEYKANG--------------KVIRWTEVFFLESRLTEHVAKAFCLALCPHLKLLKED---GMTKLGLRVTL------------DSDQVGYQAGSNGQPLPSQYMNDLDSALVPVIH--------VVMELIFYILENI--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -316084 for 3773 contacts (-83.8/contact) +
2D Compatibility (PS) -50510 + (NN) -10544 + (LL) 15988
1D Compatibility (HY) -15200 + (ID) 2850
Total energy: -379200.0 ( -100.50 by residue)
QMean score : 0.195
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