Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVGAGGSTAAPGPGAVSAGALEPGTASAA---HRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLL-FAQKRGNVKHLVLF-LHEAVLVQYVDTLKLAVPSLIYTLQNNL--QYVAISNLPAATFQVTYQLKI-LT---TALFSVLM-LNRSLSRLQWA----------SLLLLFTGVAIVQAQQAGGGGPRP---LDQNP-GAGLAAVVASCLSSGFAGVY------FEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIV-LSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPRGAAKAIAS-ASASASGPCVHQQPPG------QPPPPQLSSHRGDL--ITEPFLPKLLT-KVKGS----------------------- |
| 4OO3 Chain:A ((3-441)) | EGFTGA--------PGEVKLITLDPGHFHAALVQKVSYPQVSKDVYVYAPTGFDVD-EHLKRIQGFNTRAENPTAWNEIVYTGDDYLEKMLAEKKGNV------MIQAGNNGKKTEYIKKTLEAGINVLSDKPMAINSQSFKLLEECFAIAKQKNIMLYDIMTERNEITTMLQRELSTIPAVYGEQLKGSPEEPAIVKESVHHLFKLVDNKPLTRPVWYLDVNQQGEGIVDVTTHLVDLVQWEAFPDQIIDYRKDIELIDANRWTTSISPEEFKQVTG-TDAYPDFLKKDVENDTLKVYCNGDIVYKIK----GVTAKVSVIWNYTFPKGGGDTHFSVMKGSKADLVIRQGKEQNYQP---ELFVEAVKGVDLAAYEKDLTASMEKVSAEYPGVALNKVGDGVWQVEIPAKYRVGHEAHFGQVTEHFLDYLKEGKLPDWEVPNMLAKYYTTTSALDMAKAKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240898 for 2706 contacts (-89.0/contact) +
2D Compatibility (PS) -39437 + (NN) 142 + (LL) 1192
1D Compatibility (HY) -800 + (ID) 3750
Total energy: -283551.0 ( -104.79 by residue)
QMean score : 0.187
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