Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALLVDRVRGHWRIAAGLLFNLLVSICIVFLNKWIYVYHGFPNMSLTL-----VHFVVTWLGLYICQKLDIFAPKSLP---PSRLLLLALSFCGFVVFTN-----------LSLQNNTIGTYQLAKAMTTPVIIAIQTFC-----YQKTFSTRIQL-TLIPITLGVI----LNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFGEGGIFGPWSVSALLMVLLSGVIA---FMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFKLSEQEGSRSKLAQRP |
4MFL Chain:A ((23-345)) | MDPETVRIALGLEERTAAWLTELDEL-------------GPPAEPVRLPRGEEARDLLRRLEVPELDAEEIVAAAPDPDRDPALWWLLERTHHAIVRHMGDHRAKPRGGPPLPYEGGAAARYFHVYVFLATVPAVRRFHAERGIPDEVGWETLTQLGELVAIHRRKYGQGGMNMQWWTTYHLRGILYR-LGRLQFSLATGKDGTPHLGLAVPEWGGPLLPKAYDESLHR-ARPFFDRHFPEHGARVAWGSSWMLDPQLEEYLTEDSNIIQLARFWTLTDSAPEPGNADGDSSILEFVFRYNGQPLDELPQR-------SSLERAVIAHLKAGRHWHMRTGFVKLP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -216207 for 2206 contacts (-98.0/contact) +
2D Compatibility (PS) -29398 + (NN) -816 + (LL) 2564
1D Compatibility (HY) -1200 + (ID) 2750
Total energy: -247807.0 ( -112.33 by residue)
QMean score : 0.115
|
|
|