Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTSPSRKY---PVKKRVKIH--------------PNTVMVKYTSHYPQPGDDGYEEINEGYGNFMEENPKK--GLLSEMKKKGRAFFGTMDTLPPPTEDPMINEIGQFQSFAEKNIFQSRKMWIVLFGSALAHGCVALITRLVS-DRSKVPSLELIFIRSVFQVLSVLVVCYYQEA---PFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATVVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTM-TVMAGLTTALSMIVY------------------------RSIKEKISMWTALFTFGWTGTIWGIST---MFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPS-----IYDVFGGVIIMISVFVLAGY-----KLYWRNLRKQDYQEILDSPIK------- |
| 4Y97 Chain:A ((157-598)) | ----PSQKYNSRSNRGEVVTSFGLAQGVSWSGRGGAGNISLKVLGC-PEALTGSYKSMFQKLPDIREVLTCKIEELGSELKEHYK--IEAFTPLLAPAQEP-VTLLGQIGCDSNGKLNNKS---VILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFYQPTEEDADFE-------------QSMVLVACGPYTTSDSITYDPLLDLIAVINHDR--------PDVCILFGPFLDAKHEQVEN-CLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRIL--KHILTQRSYYPLYPPQEDMAIDYESFYVYAQLPVTPDVL-IIPSELRYFVKDVLGCVCVNPGRLTKGQVGGTFARLYLRRPAADGAER--QSPCIAVQVVRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284637 for 2782 contacts (-102.3/contact) +
2D Compatibility (PS) -39461 + (NN) -4422 + (LL) 3736
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -342034.0 ( -122.95 by residue)
QMean score : 0.165
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