Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MAGSHPYLNPPDSTHPSPPSAPPSLR--------WHQCCQPSDATN-GLLVALLGGGLPAGFVGPLSHMAYQASNLPSLELLICRCLFHLPIALLLKLRGD------PLLGPPDIRGRAYFY---ALLNVLSIGC------AYSAVQVVP--AGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTLQEGITGVYTAL---GYGQAFVGGLALSLGLLVYRSLHF----------PSCLPTVAFLSGLVGLLGSVPGLFVLQPPVLPSDLPSWSCVGAVGILALVS---FTCVSYAVTKAHP-----ALVCAVLH----SEVVVALILQY------YMLHETVAPSD--IVGAGVVLGSIAIITAWNLSCEREGKVEE------------------------- |
| 1ONE Chain:A ((1-436)) | AVSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGN----VGDEGGV----APNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEFFKD-GKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGENFHHGDKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ONE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292130 for 2735 contacts (-106.8/contact) +
2D Compatibility (PS) -33872 + (NN) -5161 + (LL) 992
1D Compatibility (HY) -1600 + (ID) 2850
Total energy: -334621.0 ( -122.35 by residue)
QMean score : 0.206
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