Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGDFYIPLSMSSQCQVDGGLDYGGWDES-VYTIS-PYSTGNTWKHYYSVGGNNLMLAIK-NAEEADPVNHNAIAQCKILLAEHMYEATM-L-W-GDIPFTESWNGT--IKYPKFDSQESVL-NGVLSLLDEALQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTL-MVMVDKDPSKA--TAIGTLLQAGGMV-SSASDNLV-FPYSAEPGNQNPKYELIELVGGTQILFFA-SNY-MLKPMQERNDPR-IPCYFEPGADG----------VYRGL--GNREPAVTDDKDNMLSSVVSS--YLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREA-CAFYGVA-------------EADIDTYVTGLPELTALTQEKALYEIHMQQWIDLM-DRPFEEFVQWRRSGTAGNEVPTL-QVPEDATSK-ELIRR-WE-YSPEEMTANINAPKESPKIWE-------KL-WFDL |
| 3MX3 Chain:A ((19-490)) | -------------------------------------KVTSSLLATGLLLDITSSSASKSFIYDELLAK---------------QMAWGESMEDYQYNVFGRSGFGGYTTLINAQKMVESVSDDNVNAYDGLAHFIKAYKIFY---MSMEMGDLPYEEALQGELGLVRPKYNTQKEV-MNFILSDLETAYELFSTAKDF---DGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFARIVASGSLMESNEDNLQMKYAANTVYPFHNTNTKHAGY--------AMLSTMLIDKFKATGDIRMFYYAKPAKAKLNEGVTADSWDAYIGTDPSLPFEQIEKAYATEQYSGFNARYTDYPSGEPVVRLGYAEQNFILAEAAVRGW----ISGDASAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEEAIAAFLETPAIQLSGEKEEDIEKILTQRYLASFMQHPYDVYYDYRRTGY-----PVLPINPATNRNTMNDRLPMRWMYPKSESDYNLEHQNEALERQFGGVDDVNKLMWILQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13916 for 3249 contacts (-4.3/contact) +
2D Compatibility (PS) -43661 + (NN) -17863 + (LL) 4584
1D Compatibility (HY) -4400 + (ID) 3850
Total energy: -79106.0 ( -24.35 by residue)
QMean score : 0.240
|
|
|