Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKNSLYIISSLFFACVLFVYATATNFQNSTSARQVKTETYTNTVTNVPIDIRYNSDKYFIS----GFASEVSVVLTGAN--RLSLASEMQESTRKFKVTADLTDAGVGTIEVPLSIEDLPNGLTAVATPQKITVKIGKKAQKDKVKIVPEIDPSQIDSRVQIENVMVSDKEVSITSDQETLDRIDKIIAVLPTSERITGNYSGSVPLQAIDRNGVVLPAVITPFDTIMKVTTKPVAPSSSTSNSSTSSSSETSSSTKATSSKTN |
1JS8 Chain:A ((1-390)) | AIIRKNVNSLTPSDIKELRDAMAKVQADTSDNGYQKIASYHGIPLSCHYENGTAYACCQHGMVTFPNWHRLLTKQMEDALVAKGSHVGIPYWDWTTTFANLPVLVTEEKDNSFHHAHIDVANTDTTRSPRAQLFSFFYRQIALALEQTDFCDFEIQFEIGHNAIHSWVGGSSPYGMSTLHYTSYDPLFYLHHSNTDRIWSVWQALQKYRGLPYNTANCEINKLVKPLKPFNLDTNPNAVTKAHSTGATSFDYHKLGYDYD-NLNFHGMTIPELEEHLKEIQHEDRVFAGFLLRTIGQ-SADVNFDVCT-KDG-----------------ECTFGGTFCILGGEHEMFWAFD-RLFKYDI--------TTSLKHL-----------RLDAHDDFDIKVTIKGIDGHVLSNKYLSPPTVFLAPA-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29694 for 1119 contacts (-26.5/contact) +
2D Compatibility (PS) -19797 + (NN) -1247 + (LL) 3484
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -49254.0 ( -44.02 by residue)
QMean score : 0.139
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