Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKMEKKWPFVFNGIVIFCLILLILGMRWQAKKEESEVL--NVTESLQKESEITSFSEEEEAVLYMLSALKKNDLDMALRGCAIDETALQINFVKTAEELPGMQLIDLPAPTSDYSYYFPLTSAEMTKAYIEQFEELSTEIPEIETLEVLEIAEKKEKEREEQLAECLAAQEVSELEIYVKCGEQSYRLGFTAVQYEKNWKIHSLKEGLLYETDIPACVQMEEMREAKKTYVLPNQLTGANYFQAM-PISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTMLYGFLGTEDARLYGKSEEQLNKLRGKLNPEYMVYLDLIKVIPIETEENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPALSLESGEVMRLSKEESRKTSEQSVLKAEKNER
1NVM Chain:B ((1-312))---MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAK--PGIRLIDLT-PAAIGPYCVPVVNLEEHLGK-LNVNMVT--CGGQATIPMVAAVSRV--------------AKVHYAEIVASISSKS-----AGPGTRAN---------------------IDEFTETTSKAIEV--IGGAAKGKAIIIMNPAEPPLIMRDTVYVLSA---------------AADQAAVAASVAEMVQAVQAYVPGYRLKQQV-----QFDVIPESAPLNIPGLGRFSGLKTSVFLEVEGAAHYLPAYA------------------------------GNLDIMTSAALATAERMAQSMLNA----------


General information:
TITO was launched using:
RESULT:

Template: 1NVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -14383 for 2839 contacts (-5.1/contact) +
2D Compatibility (PS) -32922 + (NN) -10438 + (LL) 8272
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -59621.0 ( -21.00 by residue)
QMean score : 0.135

(partial model without unconserved sides chains):
PDB file : Tito_1NVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NVM-query.scw
PDB file : Tito_Scwrl_1NVM.pdb: