Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SMHPQAVAAVLPAGGCGERMGVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHK---RISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCSDYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGHLLEEVLKSELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQETQKLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQKLQESLRQGAIIIASLIKERNSGLIGQLLIA |
| 4NAL Chain:A ((3-226)) | ----KSVSVILLAGG---------PKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCD----PFFRDIFEEYEESIDVDLSFAIPGKERQDSVYSGLQEI---DVNS-----ELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKT----TLWEMQTPQVIKPELLKKGFELVKSEGLEV-TDDVSI-VEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154103 for 1609 contacts (-95.8/contact) +
2D Compatibility (PS) -21491 + (NN) -1149 + (LL) 16220
1D Compatibility (HY) -14800 + (ID) 3000
Total energy: -178323.0 ( -110.83 by residue)
QMean score : 0.195
|
|
|