Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRILSLLGVIALFLGVILVSCGNDDDNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYNENGEYLGDSYLVNKVTENKISCQTGKEGSMMTCAGSVISTSEQA-GKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE |
4A08 Chain:A ((823-884)) | --------------------------------------------------------------------------AHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5606 for 322 contacts (17.4/contact) +
2D Compatibility (PS) -6610 + (NN) -1857 + (LL) 5184
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -577.0 ( -1.79 by residue)
QMean score : 0.180
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