Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCR-ATQW----LDLRFVSGPGDLLR-----GMVARRSEETVVALRNAQLVTFTAMDIGH---QHALVPVLTAGLSGRKPARFD----DFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVH------PTKAFDGEWISTFTPG-----SADAIAMAVERLTASLPSGSWF------PDQPLTRDFDEDAATHREPVLQRRTQKA |
| 1AF7 Chain:? ((1-274)) | SVLLQMTQRLALSDAHFRRICQLIYQRA-----GIVL---ADHKRDMVYNRLVRRLRALGL--------DDFGRYLSMLEANQNSAEWQAFINALTTNLTAFFREAHHFPILAEH------ARRRHGEYRVWSAAASTGEEPYSIAITLADALGM-APGRWKVFASDID------TEVLEKARSGIYRLSELK--TLSPQQLQRYFMRGTGPH------------------EGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSENFSNLVREFSLRGQTVYALS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79278 for 1595 contacts (-49.7/contact) +
2D Compatibility (PS) -25294 + (NN) -10886 + (LL) 4160
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -120398.0 ( -75.48 by residue)
QMean score : 0.275
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