Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEGVSYSDGHFLTKSGGVINFRKTRVTSITITILGNYGLRVVNGELQNTPLTFKGADFKSSTLKDELLIPLEG-AVQLNTAPSTALCIFITTDHVYRELCMMQFLTDVDKTPFLVVLRSESKHETIQYMHIVTVHPFLSLTA
1JJU Chain:A ((274-351))
---------------------AAPQVLAVAPA-------RLKIGE--ETQLRVAG-----TGLGSDLTLP-EGVAGSVESAGNGVTVLKLTA----------------TGTPGPVSLELGG-----QKVDLVAYD-------
General information:
TITO was launched using:
RESULT:
Template:
1JJU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43364 for 533 contacts (-81.4/contact) +
2D Compatibility (PS) -8445 + (NN) -1568 + (LL) 3896
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -53731.0 ( -100.81 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1JJU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JJU-query.scw
PDB file :
Tito_Scwrl_1JJU.pdb
: