Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEKQIDTSIITSTHPRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYPILTWISSPDNSYNGPFMSWYFANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINNVTEMAPTSPIKTN |
| 1UYJ Chain:A ((16-295)) | SYDNVDTLIEKGRYNTKYNYLKRMEKYYPNAMAYFDKVTINPQGNDFYINNPKVELDGEPSMNYLEDVYVGKALLTNDTQQEQKLKSQSFTCKNTDTVTATTTHTVGTSI------QATAKFTVPFNETG---VSLTTSYSFANTNTNTNSKEITHNVP---SQDILVPANTTVEVIAYLKKVNVKGNVKLVGQVSGSEWGEI---PSYLAFPRDGYKFSLSDTV---------NKSDLNEDGTININGKGNYSAVMGDELIVKVRNLNTNNVQEYVIP--------VDSNIVKYRSLSIKAPGI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32461 for 2042 contacts (-15.9/contact) +
2D Compatibility (PS) -29555 + (NN) -10670 + (LL) 1696
1D Compatibility (HY) -6000 + (ID) 2050
Total energy: -79040.0 ( -38.71 by residue)
QMean score : 0.214
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