Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------GA--LTTSTRQGSRVVGFMD--FIIALGWQIIPSNIRYIYILNCSQFMPTSDVTTIYFQADSGLESIFVMDSPFYASCTQQLPDK----TIKTYGVTISKKQSIISINFSSSLEPNIMVSAWTASITRTQ
1UXZ Chain:A ((1-131))
MVIATIQAEDHSQQSGTQQETTTDTGGGKNVGYIDAGDWLSYAGTPVNIPSSGSYLIE-YRVASQNGGGSLTFEEAGG--------APVHGTIAIPATGGWQTWTTIQHTVNLSAGSHQFGIKANAG---GWNLNWIRINKTH--
General information:
TITO was launched using:
RESULT:
Template:
1UXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64886 for 730 contacts (-88.9/contact) +
2D Compatibility (PS) -12085 + (NN) -8714 + (LL) 1280
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -86405.0 ( -118.36 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_1UXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UXZ-query.scw
PDB file :
Tito_Scwrl_1UXZ.pdb
: