Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGK-DLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR |
2KK4 Chain:A ((1-95)) | ------------------------------------------------------------------------------------------------------------------------------------------QGHMDLICMYVFKGEESFGESIDVYGDYLIVKVGTEFLAVP-----------KKSIKSVEDGRIVIGEFDEEEARELGRKWLEEK--SKPVTLEELKSYGFGEEGEGS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11362 for 608 contacts (-18.7/contact) +
2D Compatibility (PS) -10045 + (NN) -4158 + (LL) 12128
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -18437.0 ( -30.32 by residue)
QMean score : 0.035
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