Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLLCLLALLLCTTVFAQPQQV----VVGVSGNGYVTRQQDGARITQRGVTHWTNPKSIVSIYFYLHQPTTAD-LS-LYAKGHSEIKVSYGKKGFKVNLQSNDFTKVPVGSIDIRQAGYVRIDLQGV-SKSGEGFGEIKQLIAD----------NVTGKSNYVKDFSDYWGRRG-----PSVHLGYALPEGDTEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTE--RRILFSV---W-----SPFDTQNPKEIPDD---QKIKLLRQGKDVHIG-EFGNEGSGGQSYLKYPWKAGNTYKFLMQIRPDGNGNTTYTAYFYATDEKEWKLIASFLR-PKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATA---SAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTG---KEPEIDWEALKQL |
| 1QHO Chain:A ((1-407)) | -----------------SSSASVKGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKM-YWGGDLEGVRQKLPYLKQLGVTTIWLS----------PVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGN-WTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFNSGFSKSLADKLYQKKDIFLVGEWYGDDPGTANHLEKVRYANNSGVNVL----DFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYKYKENLITFIDNHDMSRFL----SVNSNK------ANLHQALAFILTSRGTPSIYYG----TEQYMAGGNDPYNRGMMPAFDTTTTA-FKEVSTLAGLRRNNAAIQY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 59887 for 2857 contacts (21.0/contact) +
2D Compatibility (PS) -38203 + (NN) -11010 + (LL) 4876
1D Compatibility (HY) -4000 + (ID) 2350
Total energy: 9200.0 ( 3.22 by residue)
QMean score : 0.074
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