Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMRVYSLLFMMLFALSIGANAQVKFFTDVNSKQIKTLQVKVAGELISEPYIALGGEEQIEINFDGLGSGYTRYAYNVVHCNADWTQSQLSPIEYMNGFQGTTIDDFANSIGTTTQYSNYRLLLPNDDVQFKVSGNYAIQVYNEDTPDQIIFTACFSVVEPVVNISASVSGNTDIDTNQSHQQVSFNINNKNFPITYPQTDLKIFVYQDNRRDNAVTDLQPMSILENQISYTYNRNLIFPAGNEYRRMEFLSNKYNGMHVENISFHNPYYNVELMTDYRRDKGTYQYDQDQDGRFFIRCSDCNDPDTEADYYIVHFTLACDPLPDGSVYLNGELFNNVLDEKSKMGYNFETKQYEKAVLLKQGSYNYQYLFVPTGSSVGQ-TGPIEGNYYQTQNEYSIYVYYRPMGARYDRLIGVTTVRNEMQVF |
4CFE Chain:B ((94-170)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPTVFRW-TG--GGKEVYLSGSFNNW---SKLPLTRS--HNNFVAILDLPEGEHQYKFFV--DGQWTHDPSEPIVTSQLGTVNNIIQ--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6040 for 472 contacts (-12.8/contact) +
2D Compatibility (PS) -8061 + (NN) -1679 + (LL) 21148
1D Compatibility (HY) -2400 + (ID) 750
Total energy: 2218.0 ( 4.70 by residue)
QMean score : 0.057
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