Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGPVAGNYVHDFTANGTSSSFYTIAGNLSTSKGTATYNGKTLTQCLKMETATSISFTAPSAGKLTLVFAEAAATAKVDGNKVTASNGIITVDLAQGAHTITKADACNLFYMEYAA------HHHHHH
2KPO Chain:A ((1-110))
MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKM-----------------EIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24860 for 765 contacts (-32.5/contact) +
2D Compatibility (PS) -10895 + (NN) 1135 + (LL) 896
1D Compatibility (HY) 0 + (ID) 900
Total energy: -34624.0 ( -45.26 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_2KPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KPO-query.scw
PDB file :
Tito_Scwrl_2KPO.pdb
: