Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MQRQPVSSS-RILSIGYDPDNRMLEIQFREQGTYQYLGVPERAHQ--NFMSAVSKGRFFDGVIKGKFLCRKIG--------------------------------------------- |
| 1JMX Chain:A ((364-494)) | KVEEVKVVPAFSIARIGENGASVPKVQGRFEAEAWGKDANGQPLRIGYLP-ASWKVEPFNERAVEDEDVKFAGKMQA------DGVFVPGGAGPNPERKMMTNNAGNLKVIATLADGGQTGEGHMIVTVQRWNNPPLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 371 for 276 contacts (1.3/contact) +
2D Compatibility (PS) -6618 + (NN) -945 + (LL) 532
1D Compatibility (HY) -400 + (ID) 600
Total energy: -7660.0 ( -27.75 by residue)
QMean score : 0.366
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