Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELG--LIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGS-AADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTS-----------VAEPNWWT----WRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNF--KQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWE---ISRDAVYLERAVDLSLWFFKNNPAQAQMYY-------------PVTGIAFDGID-SATTVNKNSGA----------------------E------STIEALLTLQLIESIPDAKRMLESALEKRNIKQ---------------------------------------------------------------------------------------------------------------------------------------------- |
1TF4 Chain:A ((1-605)) | EPAFNYAEALQKSMFFYEAQRSGKLPE-NNRVSWRGDSGLNDGADVGLDLTGGWYDAGDH--VKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVG-DGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFY-------NSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDF-------LSTEQQTDLRSYRW---TIAWDDKSYGTYVLLAKETGKQKYIDDANRWLDYWTV--GVNGQR--VPYSPGGMAVLD----TWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGGTPLADFPPTEEPDGPEIFVEAQINTPGTTFTEIKAMIRNQSGWPARMLDKGTFRYWFTLDEGVDPADITVSSAYNQCATPEDVHHVSGDLYYVEIDCTGEKIFPGGQSEHRREVQFRIAGGPGWDPSNDWSFQGIGNELAPAPYIVLYDDGVPVWGTAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127368 for 3398 contacts (-37.5/contact) +
2D Compatibility (PS) -42028 + (NN) -15866 + (LL) 3084
1D Compatibility (HY) -400 + (ID) 2800
Total energy: -185378.0 ( -54.56 by residue)
QMean score : 0.333
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