Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPIL-ADEVQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSR----------GMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFR-----HIGNNECRISALVPLVAESYGIYKFITSMLRAMHSS-----TGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL---------------- |
| 1HX8 Chain:A ((22-299)) | -------------QGLAKSVCKATTEECIGPKKKHLDYLVHCANEPNVSIPHLANLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTF-NLSSFLDKGTGGMGVPGGRMGYDMSPFIRRYAKYLNEKSLSYRAMAF-----------DFCKVE----GSLRSMNAEKLLKTLPVLQAQLDALLEFDCQSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEQHLATL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107701 for 1774 contacts (-60.7/contact) +
2D Compatibility (PS) -24755 + (NN) -9829 + (LL) 1624
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -149461.0 ( -84.25 by residue)
QMean score : 0.333
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