Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDTGLRKRREDEKSIQSQEPKTTSLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVLLA-QGNT----KN-F---DNSF---EGA--QL--SVGAI---SLAF-YNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSYF---TVMTAT---------------ELLQSQAVAVTFGDRVLYP-ASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISVRRLTPAPAIIFYGIIATIYIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVFLVLAPIISKPTWEYLYCVLFILSGLLFYFLFVHYKFGWAQKISKPITMHLQMLMEVVPPEEDPE |
| 3DH4 Chain:A ((52-349)) | -------------------------AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIG-LA-IASYEWMSAITLIIVGKYFLPIFIEK-GIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGI----PL--MYSILGLALFALVYSI------VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSV-SEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92057 for 1651 contacts (-55.8/contact) +
2D Compatibility (PS) -24770 + (NN) 8894 + (LL) 1932
1D Compatibility (HY) 2400 + (ID) 800
Total energy: -104401.0 ( -63.24 by residue)
QMean score : 0.020
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