Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGKQ-----------RDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENKD--KPYLLYFNIFSCILSSNIISV-AENGLQCPTPQVCVSSCPEDPWTVGKN-EFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGRCFPWTNVTPP--ALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVALVLSLLFILLLRLVA--GPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVG-------------------QMMSTMFYP--------LVTFVLLLICIAYWAMTA---LYLATSGQPQYVLWASNISSPGCEKVPI-NTSCNPTAHLVNSSCPGLMCVF---QGYSSKGL------IQRS-----VFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYW------------AFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVI------LEYIDHKLRGVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGA---YVIASGFFSVFGMCVDTLFLCFLEDLER-NNGSLDRPYYMSKSLLKILGKKNEAPPDNKKRKK |
| 3KX2 Chain:A ((1-755)) | MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDA--GEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS-------------------GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAME----DHDLSRYSCIILDEAHER----------TLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRY--FNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLV-HFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEI-LTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEY-GIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYN-LELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KX2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -568812 for 5335 contacts (-106.6/contact) +
2D Compatibility (PS) -69980 + (NN) -7099 + (LL) 2716
1D Compatibility (HY) -2400 + (ID) 5000
Total energy: -650575.0 ( -121.94 by residue)
QMean score : 0.174
|
|
|