Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGCKVLLNIGQQMLRRKVVDCSREETRLSRCLNTFDLVALGVGSTLGAGVYVLAGAVARENAGPAIVISFLIAALASVLAGLCYGEFGARVPKTGSAYLYSYVTVGELWAFITGWNLILSYIIGTSSVARAWSATFDELIGRPIGEFSRTHMTLNAPGVLAENPDIFAVIIILILTGLLTLGVKESAMVNKIFTCINVLVLGFIMVSGFVKGSVKNWQLTEEDFGNTSGRLCLNNDTKEGKPGVGGFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKNPQKAIPVGIVASLLICFIAYFGVSAALTLMMPYFCLDNNSPLPDAFKHVGWEGAKYAVAVGSLCALSASLLGSMFPMPRVIYAMAEDGLLFKFLANVNDRTKTPIIATLASGAVAAVMAFLFDLKDLVDLMSIGTLLAYSLVAACVLVLRYQPEQPNLVYQMASTSDELDPADQNELASTNDSQLGFLPEAEMFSLKTILSPKNMEPSKISGLIVNISTSLIAVLIITFCIVTVLGREALTKGALWAVFLLAGSALLCAVVTGVIW--RQPE--SKTKLSFKVPFLPVLPILSIFVNVYLMMQLDQGTW---VRFAVWMLIGFIIYFG--YGLWHSEEASLDADQARTPDGNLDQCK |
| 3ZUM Chain:L ((75-176)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGGAPLAKGGLWQII------TICATGAFVSWALREVEICRKLGIGYHIPFAFAFAILA-YLTLVLFRPVMMGAWGYAAPYGIWTHLDWVSNTGYTYGNFHYNPAHMIAISFFFTNALALALH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZUM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55573 for 451 contacts (-123.2/contact) +
2D Compatibility (PS) -9396 + (NN) -658 + (LL) 38224
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -36803.0 ( -81.60 by residue)
QMean score : 0.090
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