Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MAAATAAAALAAA--DPPPAMPQAAGAGGPTTRRDFYWLR---------------SFLAG--GIAGCCAK------TTVAPLDRVKVLL-QAHNHHYKHLGV-FSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGIS--GHV-HRLMAGSMAGMTAV--ICTYPLDMVR------VRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMP---TILGMAPYAGVSFFTFG--TLKSVGLSHAPTLL----------------------GRPSSDNPNVLV--------LKT---HVNLLCGGVAGA-IAQTISYP----FDVTRRRMQLGTVLPEFEKCLTM-------------RDTMKYVYGHHGIRKGLYRGLS--------LNYIRCIPSQAVAFTTYEL-MKQFFHLN------------ |
| 4PXG Chain:A ((26-509)) | TKQAVHNRAKEAVGKSVLELNGGESIKSSVGDAFENWFGVALKATPFKKLKNGKYSSKERLVLNIINYEKVANENFETSSFLSKNNTIELAFYEYIKGTPSDNWIIKEAVLYEMHKNPIDYEIIKQDWEIINQYINEGKAHELSEGLTSYLAPCTKGANASSLRNQPYSDIKAKQRAFSLKSGYMTSILRKYVLGDEKIDSIVKDPFEIKEKSIEDIVFEKFQPYINWSIDKLCEHFSINKGEKGLNYRIASAILNLKGKTTKSKPFPEVEEFEKSSIVVKTVHFNKKNVNKESMSFGAFKFEELANEEWEDSEGYPSAQWRNFLLETRFLFFVVKEDEDGVDIFKGIKFFSMPEEDINGPVKRMWDDTVKKLKEGVTLEAVPDKSTKDGWRIKNNFVDKSDDLICHVRPHTNNRD--YRGGSNADKLPKKINWINRPDSDDY---SDEWMTKQSFWINNDYIKKQVEDLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127600 for 2030 contacts (-62.9/contact) +
2D Compatibility (PS) -33161 + (NN) 6651 + (LL) 332
1D Compatibility (HY) -6800 + (ID) 2950
Total energy: -163528.0 ( -80.56 by residue)
QMean score : 0.072
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