Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTAYLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQH-YYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLT---YSLCC-LTKLSQD-YFVLLVGRALGGLSTAL----LFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLA--LAGALALRNWGENYDR-QR-A---FSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVF----LWTP-VLDPH---GAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWF-RVPLHSLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL |
| 2CFQ Chain:A ((4-398)) | --------------------------------LKNTNFWMF----GLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKV------SR--RSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQF--VFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSC-TYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIIN-RIGGKN--ALLLAGTIMSVRIIGSSFAT-----SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -352430 for 2975 contacts (-118.5/contact) +
2D Compatibility (PS) -38374 + (NN) -16898 + (LL) 5332
1D Compatibility (HY) -14800 + (ID) 2250
Total energy: -419420.0 ( -140.98 by residue)
QMean score : 0.237
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