Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MYTSHEDIGYDFEDGPKD---KKTLKPHPNIDGGWAWMMVL----------SSFFVHILIMGSQMALGVLNVEWL--EEFHQSR--GLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGLVNSLGWVLSAYAANVHYLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMLIQGAVSLNLCVCGALMRPLSPGKNPND-PGEKDVRGLPAHSTESVKSTGQQGRTEEKDGGLGNEETLCDLQ--------AQECPDQAGHRKNMCALRILKTV----------SWLTMRVRKGFEDWYSGYFGTASLFTNRMFVAFIFWALFAYSSFVIPFIHLPEIVNLYNLSEQNDVFPLTSIIAIVHIFGKVILGVIADLPCISVWNVFLLANFTLVLSIFILPLMHTYAGLAVICALIGFSSGYFSLMPVVTEDLVGIEHLANAYGIIICANGISALLGPPFAGWIYDITQKY-------------------------------------DFSFYICGLLYMIGILFLLIQPCIRI---------IEQSRRKYMDGAHV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1JB0 Chain:A ((13-755)) | RVVVDNDPVPTSFEKWAKPGHFDRTLARGPQ-TTTWIWNLHALAHDFDTHTSDLEDISRKIFSAHFGHLAVVFIWLSGMYFHGAKFSNYEAWLADPTG-----IKPSAQVVWPIVG---QGILNGDVGG-GFHGIQITSGLFQLWRASGI-----TNEFQLYCTAIGGLVMAGLMLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVSLPINKLLDAGVAAKDIPLPHEFILNPSLMAELYPKVDWGFFSPFFTFNWAAYSDFLTFNGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMYRTNWGIGHSLKEILEAHKGPFTGAGHKGLYEVLTTS-WHAQLAINLAMMGSLSIIVAQHMYAMPPYPYLATDYPTQLSLFTHHMWIGGFLVVGGAAHGAIFMVRDYDPAMNQNNVLDRVLRHRDAIISHLNWVCIFLGFHS--FGLY-VHNDTMRAFGRPQDMF------SDTGIQLQPVFAQWVQNLHTLAPGGTAPNAAATASVAFGGDVVAVGGKVAMMPIVLGTADFMVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISVVIFHFSWKMQSDVWGTVAPDGTVSHITGGNFAQSAITINGWLRDFLWAQASQVIGSYGSALSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIIQGRAVGVAHYLLGGIATTWAFFLARIISVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268441 for 3255 contacts (-82.5/contact) +
2D Compatibility (PS) -50795 + (NN) -16078 + (LL) 1868
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: -350446.0 ( -107.66 by residue)
QMean score : 0.138
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