Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGAGGPRRGEGPPDGGWGWVVLGACFVVTGFAYGFPKAVSVFFRALMRDFDAGYSDTAWVSSIMLAMLYGTGPVSSILVTRFGCRPVMLAGGLLASAGMILASFATRLLELYLTAGVLTGLGLALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQQLLERFGWRGGFLLLGGLLLHCCACGAVMRPPPGPGPRPRRDSAGDRAGDAPGEAEADGAGLQLREASPRVRPRRRLLDLAVCTDRAFAVYAVTKFLMALGLFVPAILLVNYAKDAGVPDTDAAFLLSIVGFVDIVARPACGALAGLARLRPHVPYLFSLALLAN---GLTDLSSARARSYGALVAFCVAFGLSYGMVGALQFEVLMAAVGAPRFPSALGLVLLVEAAAVLIGPPSAGRLVDVLKNYEIIFYLAGSEVALAGVFMAVATNCCLRCAKAAPSGPGTEGGASDTEDAEAEGDSEPLPVVAEEPGNLEALEVLSARGEPTEPEIEARPRLAAESV- |
4XB6 Chain:C ((1-353)) | ----------------------------MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAK---------LAVSEPLDTTGMRLERRI----------SAVYKD---IPGGQLLG---------------------------PTYDYTHRLLDFTLLANGEAP----------TLTTADSEQQPSPHVFSLLARQGLAKF-----------------------EEDSGAQPDDITRTPPV--------YPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRS------------------GYIDVSIVPEELG---FAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSE--------RKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHAD------NVEVAGFVSHLKL--PHYVDFQAELELLKRLQQEQNH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99458 for 2408 contacts (-41.3/contact) +
2D Compatibility (PS) -36614 + (NN) -9369 + (LL) 9152
1D Compatibility (HY) 1600 + (ID) 3800
Total energy: -138489.0 ( -57.51 by residue)
QMean score : 0.121
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