Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASVLSYESLVHAVAGAVGSVTAMTVFFP-LDTARLRLQVDEKRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFN-SLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH |
4G6D Chain:B ((1-198)) | -----------------------MKLKILDKDNATLNVFHRNKEHKTIDNVPTANLVD----------WYPL-------SNAYEYKLSRNGEYLELKRLRSTLPSSY---------GLDDNNQDIIRDNNHRCKIGYWYNPAVRKDNLKIIEKAKQY-----GLPII-TEEYDANTVEQGFRDIGVIFQSLKTIVVTRYLEG--------KTEEELRIFNMKSEESQLNEALKESDFSVDLTYSDLGQIYNMLLLMKKISK------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81619 for 1390 contacts (-58.7/contact) +
2D Compatibility (PS) -19960 + (NN) 3429 + (LL) 10252
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -94848.0 ( -68.24 by residue)
QMean score : 0.264
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