Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------MCRCPPEHHDGRMTSAEVGAAAGGAQAAGPPEWPPGSPQALRQPGRARVAMAALVWLLAGASMSSLNKWIFTVHGFGRPLLLSAL----HMLVAALA----CHRGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQ----LVTTTTPLFTLALSALLLGRRHHPLQLAAMGPLCLGAACSLAGEFRTPPTGCGFLLAAT-------------CLRGLKSV-----QQSALLQEERLDAVTLLYATSLPSFCLLAGAALVLEAGVAPPPTAGDSRLWAC--ILLSCLLSVLYNLAS-------FSLLALTSALTVHVLGNLTVVGNLILSRLLF-----GSRLSALSYVGIALTLSGM---FLYHNCEFVASWAARRGLWRRDQPSKGL------------------------------------ |
1BJ4 Chain:A ((1-470)) | DADLWSSHDAMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPATGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVAATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239884 for 2822 contacts (-85.0/contact) +
2D Compatibility (PS) -36721 + (NN) -8674 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 2250
Total energy: -288729.0 ( -102.31 by residue)
QMean score : 0.204
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