Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALLGGGLPAG--------FVGPLSRMAYQASNLPSLELVICRCLFHLPIA------LLLKLRGDP------LLGPPDIRGRTCFCALLNVLNIGCAYS-AVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWC--GLLGSILGLIIIVG--------PGLWTLQEGTTG-------VYTGLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFVLQSPVLPSDLLSWSCVGAVGILTL----------VSFTCVGYAVTKAHPALVCAV-LHSEVVMALILQYFMLHETVAPSDIMGAGVVLGSIAIITARNLICERTGKVEE---------- |
| 1OFG Chain:A ((1-381)) | --ATLPAGASQVPTTPAGRPMPYAI------RPMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE--YGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYS--TTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPAN-NQFSAQLDHLAEAVINNK---PVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274443 for 2374 contacts (-115.6/contact) +
2D Compatibility (PS) -34153 + (NN) -13370 + (LL) 1844
1D Compatibility (HY) 4800 + (ID) 2100
Total energy: -317422.0 ( -133.71 by residue)
QMean score : 0.223
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