Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGKVAVQECGPPAVSWVPEEGEKLDQEDEDQVKDRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVALGQY-TSQGSVTA-------WRKICPLFQGIGLASVVIESYLNVYYIIILAWALFYLFSSFTSELPWTTCNNFWNTEHCTDFLNHSGAGTVTPFENFTSPVMEFWERRVLGITSGIHDLGSLRWEL------ALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVILLIRGVTLP----GAYQGIIYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAG--FVVFSILGFMSQEQGVPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASIDMFPRQLRKSGRRELLILTIAVMCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSLFEVVCISWVYGADRFYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNVYVYPPWGYSIGWFLALSSMVCVPLFVVITLLKTRGPFRKRLRQLITPDSSLPQPKQHPCLDGSAGRNFGPSPTREGLIAGEKETHL |
| 4HOD Chain:A ((5-437)) | -----------------------------------REHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRN--RFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPP---------TD-----PDSILRPFKEFL--------YSYIGVPKG--DEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTL---FILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKASVILGGSISIPAAVAFFGVANAVAIAKAGAF--NLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIA-----FLEDELKLSRKHAVLWTAAIVFFSAHLVMFLNKSL---DEMDFWAGT-IGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAERRRNHESAGT-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -477959 for 3642 contacts (-131.2/contact) +
2D Compatibility (PS) -41843 + (NN) -3396 + (LL) 6888
1D Compatibility (HY) -45200 + (ID) 5850
Total energy: -567360.0 ( -155.78 by residue)
QMean score : 0.284
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