Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDPNSCVDNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIG---TSLVSLVVPVSIGMFVNHKWPQKAKII---LKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSL--GFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK |
| 4N7W Chain:A ((37-273)) | ----------------------------------------LLMLIMFAMGVTLRLDDFKRVLSRPAPVAAATFLHYLIMPLTAWILAMLFRMPPDLSAGMVLVGSVASGTASNVMIYLAKGDVALSVTISAVSTLVGVFATPLL----TRLYVDA---TISVDVVGMLKSILQIVVIPITAGLVIHHTFTKTVKRIEPYLPAMSMV-CILAIISAVVAG---SQSHIASVGFVVIIAVILHNGIGLLSGYWGGKLFGFDESTCRTLAIEVGMQNSGLAATLGKIYFSPLAALPGALFSVWHNLSGSLLAGYWSGKPVKKDQE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203817 for 1907 contacts (-106.9/contact) +
2D Compatibility (PS) -22846 + (NN) -3369 + (LL) 6716
1D Compatibility (HY) -24400 + (ID) 3800
Total energy: -251516.0 ( -131.89 by residue)
QMean score : 0.214
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