Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSPVRDLARNDGEESTDRTPLLPGAPRAEAAPVCCSARYNLAILAFFGFFIVYALRVNLSVALVDMVDSNTTLEDNRTSKACPEHSAPIKVHHNQTGKKY-QWDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLS--ISYAGAQLGTVISLPLSGIICYYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRNQLSSQKSVPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNTVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNWALNDHHGHRH |
| 3H9P Chain:A ((90-240)) | ----------------------------------------------------------------TDFRDSLSVLEAFRLS----------NLKDRKTEEEIAQKKINLYEWMKMAPEENLIARELVDGFKISIEGAKFLLSFGNSGKAVVELYYHLLSKF-PDPLVIAKMGREYAEKIT------EWAEKARTEEERKELDEKLLKDGANPGTIADLTASSIFLALAEGWR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61028 for 936 contacts (-65.2/contact) +
2D Compatibility (PS) -13880 + (NN) 2911 + (LL) 26000
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -51147.0 ( -54.64 by residue)
QMean score : 0.053
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