Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAGASVNRVVSPGPLHCLKVILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNDVFDPDSTQVH-------MISAAMAGFTAITATNPIWLIKTRLQLDARNRGERRM-GAFECVRKVYQTDGLKGFYRGMSASYAGIS-ETVIHFVIYESIKQKLLEYKTASTMENDEESVKEASDFVGMMLAAATSKTCATTIAYPHEVVRTRL---REEGTKYRSFFQTLSLLVQEEGYGSLYRGLTTHLVRQIPNTAIMMATYELVVYLLNG |
4C9J Chain:A ((29-318)) | -------INFLMGGVSAAIAKTAASPIERVKILIQN----------QDEMIKQGTLDKKYS-GIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFA----FKDKIKLMFGFKKEEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS--ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLK----------------------------FLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGV-ISMYDQLQMILFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75735 for 1884 contacts (-40.2/contact) +
2D Compatibility (PS) -26717 + (NN) -1382 + (LL) 3716
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -120468.0 ( -63.94 by residue)
QMean score : 0.160
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