Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMVVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIH--------DRKSGKKFSIEEALQSGRLTPAHYDRYVNKDMSIQELAVLVSGQK
1T11 Chain:A ((140-210))
------------------------------------MLETLRKQQATWKEVDEAAENGKRVSIDFVGSIDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGME----------
General information:
TITO was launched using:
RESULT:
Template:
1T11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4498 for 286 contacts (15.7/contact) +
2D Compatibility (PS) -6638 + (NN) -1858 + (LL) 2656
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -4192.0 ( -14.66 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_1T11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T11-query.scw
PDB file :
Tito_Scwrl_1T11.pdb
: