Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKLARKSVPFIIAVALLAACLLAVGLSPLVLPDYKGTIEEREQPQNFNLLYLNSGEELNLYPWNLYTGQEQELFEEEIVSFAANSVRILGGGSWTDEELYPLIKFRYSGQDLRFLKDMALTEKDGRRYLVNMALDPNGLCYFSYVNQDEREATADEMDQALGKLQEDWEKFLSDPLPADSEVDLYEEKPSGSYQLDDGELKTDNAFYMFFMRCQMLSDQMRKEQYSDYIGDNLYTIWELVLKSEFTSLSYDNHIYAMYSNDGGTSMVLIYSPIEERFVGFSLKY |
2REU Chain:A ((84-167)) | ----------------------------------------------------------------------------KESMSFGAFKFEELANEEWEDSEGYPSAQWRNFLLETRFLFFVVKEDEDGVDIF-------KGIKFFSMPEEDINGPVKRMWDDTVKKLKE---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2REU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 980 for 429 contacts (2.3/contact) +
2D Compatibility (PS) -8980 + (NN) -1730 + (LL) 13712
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -818.0 ( -1.91 by residue)
QMean score : 0.050
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