Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKKILGLLGLALAAAFVLTACGQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKENKGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKNIKSNPKNLDIKEVDASQTARNLASVDAAVVNNSYAVPAKID-FKTSLYKEKVNEGS-KQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAVKKVIKKTAKGVDEPVW |
4K3F Chain:A ((4-240)) | ------------------------------SLTVAATPVPHA--EILNVVKPLLAKEGVDLKIKEFTDYVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDLVAVTGVHIEPLGAYS------SKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKDIVDNPKNIKIRELEAATLPRVLTQVDMALINTNYALEAKLNPTKDAL----AIEGSDSPYVNILVARPDNKDSD---AMQKLAKALHSAEIKQFIQEKYKGAVVPAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49130 for 2006 contacts (-24.5/contact) +
2D Compatibility (PS) -24750 + (NN) -7261 + (LL) 2944
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -100247.0 ( -49.97 by residue)
QMean score : 0.367
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